Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817728.1_cds_XP_016499304.1_13241
CDS Infomation

[gene=LOC107817921] [db_xref=GeneID:107817921] [protein=histone-lysine N-methyltransferase setd3-like] [protein_id=XP_016499304.1] [location=complement(join(153568..153936,154144..154407,154581..154880,155445..155611,158167..158497))] [gbkey=CDS]
Sequence

ATGTCAACCAAAATGATGCTAATGGCTAACTCCCTAACACACGTGCGTCCTCTCACTTGT
GCCGCCGCCGCTGGTTCACGGCTAGTGCCACAACCGCCAGACCTCATCAAATGGGTCAAA
AGCGAAGGTGGGTTTGTTCACAAATCCGTACAAATAGCACAAGGAGACTCCTTTGGCCTT
GGCTTAGTTGCTTCTGAGGATATCCCAAAAGGGTCTGATATTATTGCCCTTCCTCAACAT
ATTCCCCTCAAAATTGGTTCCTTAGAAGCAGAAACTTCACTTGATGCTGGTGCCCATTCT
GCTTTGATTAAATTAGCTCAACATGTTCCTGAGGAGCTGTGGGCTATGAAATTGGGTTTG
AAGCTTCTGCAAGAGAGAGCAAAAAAAGGTTCCTTCTGGTGGCCGTACATCAGCAATCTC
CCAGAGACTTACACAGTGCCGATTTTCTTTCCGGGCGAAGATATAAAGAACTTGCAGTAT
GCCCCTCTTCTTTATCAGGTGAACAAAAGATGCCGGTTTTTACTGGAATTTGATAAAATT
CTGAAACATGAACTTGAAAATCTTAAACCTGATGATCATCCTTTTGGTGGCCAACATGTG
GATTCATCTGCTCTAGGATGGGCTATGTCAGCTGTTTCATCTCGAGCATTCCGGTTGTAT
GGCAGTAAACGTCCTGATGGTACCCGCAGTAATGTTCCTATGATGCTTCCACTTATTGAT
ATGTGCAACCACAGCTTTGATCCAAATGCTGAGATTGTACAGGAAGAAGAGAACCGCAAT
AGGAATATGCTTGTAAAGGTGGTTGCAGGAAGGCAGATAAAGCAAAATGATCCGTTTCTA
CTCAACTATGGCTGTTTAAGTAATGATCTTTTTCTTCTAGACTATGGATTTGTCATTCCA
TCAAACCCCTACGACTGCATTGAACTTAAATACGATGCTGCTCTTCTTGATGCTGCGAGT
ATGGCTGCTGGGGTTTCATCCCCAAAATTCTCTTCACCGTCTCCATGGCAGCAGCAGATT
TTATCACATTTAAATCTAGACGGACAAAACTCTGATCTGAAGGTGACATTAGGAGGCCGG
GAGCTAGTAGAGGGGCGATTATTAGCAGCCTTGAGAGTTGTCCTATCAAATGATGAGGAG
ACAGTGCAGCAGCACGACTTGGAGGCGCTCAAATCATTGACAGTCGAAGTCCCTCTGGGA
ACATCAACTGAAGTAGCTGCTCTTCGCACCATTGTCGCGTTGTGTGTAATTGCACTTGGA
CACTTCCCAACCAAAATCATGGAGGATGAGTCATTGCTGAAGCAAAATGTTTCTCCTACT
ACTGAGTTGGCTCTCCAGTTCAGAATACAAAAGAAGTCCTTCATTGTGGATGTTATGAGA
GATCTTAGCAAGAGGGTAAAGTTACTCCTTGCCAAGGAATCTGCCCCATGA

Peptide Sequence

PEP ID

XP_016499304.1
PEP Infomation

PREDICTED: histone-lysine N-methyltransferase setd3-like [Nicotiana tabacum]
Sequence

MSTKMMLMANSLTHVRPLTCAAAAGSRLVPQPPDLIKWVKSEGGFVHKSVQIAQGDSFGL
GLVASEDIPKGSDIIALPQHIPLKIGSLEAETSLDAGAHSALIKLAQHVPEELWAMKLGL
KLLQERAKKGSFWWPYISNLPETYTVPIFFPGEDIKNLQYAPLLYQVNKRCRFLLEFDKI
LKHELENLKPDDHPFGGQHVDSSALGWAMSAVSSRAFRLYGSKRPDGTRSNVPMMLPLID
MCNHSFDPNAEIVQEEENRNRNMLVKVVAGRQIKQNDPFLLNYGCLSNDLFLLDYGFVIP
SNPYDCIELKYDAALLDAASMAAGVSSPKFSSPSPWQQQILSHLNLDGQNSDLKVTLGGR
ELVEGRLLAALRVVLSNDEETVQQHDLEALKSLTVEVPLGTSTEVAALRTIVALCVIALG
HFPTKIMEDESLLKQNVSPTTELALQFRIQKKSFIVDVMRDLSKRVKLLLAKESAP

Transcript Sequence

Gene sequence data has not been registered.